Preimplantation genetic diagnosis of the fragile X syndrome by use of linked polymorphic markers

Fragile X syndrome is the most common cause of familial mental retardation. The most common mutation is expansion of a triplet (CGG)_n repeat in the 5′ untranslated region of the FMR1 gene on Xq27.3. The expansion is refractory to PCR due to preferential amplification of the smaller allele in heterozygous cells and the high GC content of the repeat and surrounding sequences. Direct detection of the normal parental alleles in preimplantation embryos has been used for preimplantation genetic diagnosis (PGD) of this disorder. However, this approach is only suitable for approximately 63% of couples due to the heterozygosity of the repeat in the normal population. As an alternative we investigated the use of polymorphic markers flanking the mutation to track the normal and premutation carrying maternal chromosomes in preimplantation embryos. Using a panel of 11 polymorphisms, six (CA)_n repeats and five single nucleotide polymorphisms, diagnosis was developed for 90% of referred couples. Multiplex amplification of informative markers was tested in 300 single buccal cells from interested couples with efficiency and allele drop out (ADO) rates ranging from 69% to 96% and 6% to 18%, respectively. Use of this approach is accurate and applicable to a larger number of patients at risk of transmitting fragile X to their offspring. Copyright © 2001 John Wiley & Sons, Ltd.     

A comparison of different lysis buffers to assess allele dropout from single cells for preimplantation genetic diagnosis

Single cell polymerase chain reaction (PCR) for preimplantation genetic diagnosis (PGD) requires high efficiency and accuracy. Allele dropout (ADO), the random amplification failure of one of the two parental alleles, remains the most significant problem in PCR-based PGD testing since it can result in serious misdiagnosis for compound heterozygous or autosomal dominant conditions. A number of different strategies (including the use of lysis buffers to break down the cell and make the DNA accessible) have been employed to combat ADO with varying degrees of success, yet there is still no consensus among PGD centres over which lysis buffer should be used (ESHRE PGD Consortium, 1999 ). To address this issue, PCR amplification of three genes (CFTR, LAMA3 and PKP1) at different chromosomal loci was investigated. Single lymphocytes from individuals heterozygous for mutations within each of the three genes were collected and lysed in either alkaline lysis buffer (ALB) or proteinase K/SDS lysis buffer (PK). PCR amplification efficiencies were comparable between alkaline lysis and proteinase K lysis for PCR products spanning each of the three mutated loci (ΔF508 in CFTR 90% vs 88%; R650X in LAMA3 82% vs 78%; and Y71X in PKP1 91% vs 87%). While there was no appreciable difference between ADO rates between the two lysis buffers for the LAMA3 PCR product (25% vs 26%), there were significant differences in ADO rates between ALB and PK for the CFTR PCR product (0% vs 23%) and the PKP1 PCR product (8% vs 56%). Based on these results, we are currently using ALB in preference to PK/SDS buffer for the lysis of cells in clinical PGD. Copyright © 2001 John Wiley & Sons, Ltd.     

典型污染源中多环麝香的污染特征

合成麝香是一类近十多年才引起人们关注的有机污染物.合成麝香广泛分布于环境中.难降解,易生物富集,对水生生物和人体均呈现一定的生物毒性.文章对某一化妆品厂生产车闯内、外及工厂外的上、下风向大气中多环麝香进行了定性定量分析,结果表明,除ATⅡ之外,大气中检测出了五种多环麝香,其中作为对照点的上风向多环麝香总浓度为5.43ng/m3,而工厂室内、外及下风向的多环麝香浓度范围为17.25～5543.4ng/m3;气固分配实验研究发现,超过68.43%的多环麝香分布于气相中.     

新疆石化工业区颗粒物含水量和酸度对二次无机组分形成的影响

大气二次污染物是新疆独山子区大气污染物的重要组成部分,研究大气中二次组分的转化过程对区域大气污染治理有着重要意义.对新疆独山子区2015年9月至2016年7月采集到的样品进行水溶性组分分析.结果表明,水溶性无机离子(TWSIs)表现出与PM_(2.5)一致的季节变化,为冬季(67.86μg·m~(-3))秋季(13.77μg·m~(-3))春季(10.09μg·m~(-3))夏季(4.85μg·m~(-3));冬季二次无机离子(NH~+_4、SO~(2-)_4和NO~-_3)占TWSIs的98%;结合气溶胶热力学模型(E-AIM)探讨独山子区大气颗粒污染物中颗粒相含水量以及颗粒酸碱性;表明独山子区颗粒物呈酸性,年均原位pH为0.81,其中冬季样品的pH(2.93)值最高;颗粒含水季节变化为冬季(331.32μg·m~(-3))秋季(5.91μg·m~(-3))春季(5.46μg·m~(-3))夏季(1.62μg·m~(-3));年均氮氧化率(NOR)和硫氧化率(SOR)分别为0.13和0.47,表明区域污染物存在二次转化;进一步分析表明颗粒相中的硫酸盐质量浓度受到颗粒含水量和颗粒酸碱度的影响较为明显;高的颗粒相含水条件下区域硝酸盐的形成主要以非均相反应为主.     

农闲期城郊农田灌溉水中典型污染物含量与评价——以西北江三角洲为例

摸查了农田灌溉系统水环境经农（夏）闲期降水等外部强干预调理后的环境污染物含量——该值理论上是环境自净作用之后的最不利值,对农田灌溉系统水环境进行水质评价,探究其对农田土壤质量的潜在污染风险.于2019年6月中旬—7月下旬（降雨集中期）,分别在西北江三角洲城市（清远市、佛山市和江门市）实验基地周边筛选研究区,并在雨后对有覆水的水源区域、灌渠、蓄水池和田间水等采集上覆水,共采得水样27×2份,对其pH值、悬浮物（SS）、矿化度、总磷（TP）、氨氮（NH₄⁺-N）、Cd、As、Pb、Cu和Zn的含量进行检测;对各研究区pH值、SS的成因和影响,矿化度的等级,重金属均值分布等进行分析;对全样品TP、NH₄⁺-N、重金属含量进行Pearson相关性分析和描述性特征分析;通过单因子水质标识指数P_i和综合水质标识指数P分别对各采样点、各构成项目和各研究区进行水质评价.研究发现雨后农田灌溉系统水环境构成复杂,物质呈无显著性差异的迁移,灌溉沿程上覆水中大部分物质可能处于动态平衡,受局部环境影响变小,TP、NH₄⁺-N和重金属等迁移物质主要还是灌溉水体中原有的,受外力驱动扰动后在水动力作用下可能以氮磷结合形态沿灌溉系统发生远距离迁移;使用河流水质标识指数法评价农田灌溉系统水环境,发现该法可以刻画局部灌溉的水质态势,对农田灌溉系统水环境的含量特征评价做出科学、合理的解释,也可以做出综合性定量评价.虽然灌溉水系统结构差异较大,但是从整体上可以初步得出农闲期西北江三角洲农田灌溉水的灌溉风险不高的结论,总体综合水质评价级别为Ⅰ类~Ⅱ类,达到水环境功能区的使用要求.     

成都市大气颗粒物粒径分布及其对能见度的影响

使用环境颗粒物分析仪（GRIMM180）对成都市2018年10月—2019年9月0.25~32 μm的大气颗粒物数浓度粒径分布进行观测,结合细颗粒物（PM_2.5）质量浓度以及相对湿度（RH）、能见度、降水量等气象要素数据,分析了成都市大气颗粒物粒径分布及其与能见度的关系.结果表明,观测期间成都市大气颗粒物以细粒子为主,0.25~0.5 μm的粒子数浓度占总数浓度的97.75%,数浓度谱呈单峰分布,2018年秋季、2019年夏季表面积谱呈双峰分布,2018年冬季、2019年春季表面积谱呈三峰,体积谱均为三峰分布;在不同RH区间,PM_2.5质量浓度及数浓度均与能见度呈负相关,且其中0.25~0.5 μm粒径段的细颗粒物因为对可见光波段的米散射效应而对能见度产生较大影响;在不同RH情况下,不同粒径段颗粒物数浓度对能见度的影响程度有所差别：在低RH（<70%）下,0.25~0.3 μm粒径段粒子数浓度对能见度影响最大;在中等RH（70%~80%）下,0.3~0.5 μm粒径段粒子数浓度对能见度的影响最大;而在高RH（>80%）下,0.3~0.5 μm和0.5~1 μm粒径段粒子数浓度对能见度影响相当.     

机动车轮胎磨损颗粒物化学组分特征研究

为研究机动车道路行驶过程中轮胎磨损排放的颗粒物理化特性,利用轮胎轮廓仿真磨耗仪,对国内主流17种轮胎胎面进行仿真磨耗实验,获得颗粒物样品,提取并检测其中18种元素和20种多环芳烃（PAHs）的含量.结果显示,元素和PAHs含量因轮胎品牌和速度等级的不同而差异显著.18种元素平均含量为（99.04±68.43）mg/g,占样品总重的9.90%,其中Si（88.97±67.85）mg/g、Zn（6.77±1.64）mg/g和Na（1.05±0.75）mg/g的平均含量均超过1mg/g,Cd的含量最低,为（0.43±0.31）μg/g.20种PAHs含量之和（∑20PAHs）在12.13~433.64 μg/g,平均为（94.13±110.18）μg/g,PY的平均含量最高（30.98±31.27）μg/g,其次是CHR、BaP、FA、PHE和BghiP,平均含量最低的是AC（0.58±0.2）μg/g;从环数看,以4环PAHs为主（占∑20PAHs的45.03%~67.93%）,其次为3环（平均含量为15.45%）和5环（平均含量为12.62%）.总体来说,国外品牌轮胎样品中元素和PAHs含量略高于国内品牌,而主要PAHs环数略低于国内品牌.     

雨水管道沉积物中典型无机氮的干期粒径分布

以南京江北新区分流制雨水管道沉积物为研究对象,考察不同粒径沉积物中铵态氮（NH₃-N）和硝态氮（NO₃^--N）干期分布特征,分析其随干期长度的变化关系,并探讨沉积物理化性质及微生物菌群结构对NH₃-N和NO₃^--N干期分布的影响.结果表明：粒径≤0.075mm的沉积物中NH₃-N占比最高（交通区30.8%,商业区36.7%）;交通区粒径≤0.075mm的沉积物中NO₃^--N占比最高（33.0%）,而商业区粒径0.075~0.15mm沉积物中NO₃^--N占比最高（34.4%）;干期长度与交通区0.075~0.15mm粒径段的沉积物中NO₃^--N含量及商业区粒径≥0.3mm的沉积物中NH₃-N含量之间的相关性均最显著;雨水管道沉积物中NH₃-N和NO₃^--N的干期分布与O-H和N-H等官能团、表面极性和亲水性、微观形貌等有一定关联;交通区雨水管道沉积物中Gemmobacter等反硝化优势菌种（相对丰度总和为20.15%）对NO₃^--N干期分布影响更显著.     

Role of glycine on sulfuric acid-ammonia clusters formation: Transporter or participator

Glycine(Gly) is ubiquitous in the atmosphere and plays a vital role in new particle formation(NPF).However,the potential mechanism of its on sulfuric acid(SA)-ammonia(A)clusters formation under various atmospheric conditions is still ambiguous.Herein,a(Gly)_x·(SA)_y·(A)_z(z≤x+y≤3) multicomponent system was investigated by using density functional theory(DFT) combined with Atmospheric Cluster Dynamics Code(ACDC) at different temperatures and precursor concentrations.The results show that Gly,with one carboxyl(-COOH) and one amine(-NH_2) group,can interact strongly with SA and A in two directions through hydrogen bonds or proton transfer.Within the relevant range of atmospheric concentrations,Gly can enhance the formation rate of SA-A-based clusters,especially at low temperature,low [SA],and median [A].The enhancement(R) of Gly on NPF can be up to 340 at T=218.15 K,[SA]=10~4,[A]=10~9,and [Gly]=10~7 molecules/cm~3.In addition,the main growth paths of clusters show that Gly molecules participate into cluster formation in the initial stage and eventually leave the cluster by evaporation in subsequent cluster growth at low [Gly],it acts as an important "transporter" to connect the smaller and larger cluster.With the increase of [Gly],it acts as a "participator" directly participating in NPF.     

加入SOA示踪的深圳大气PM2.5受体模型源解析

为厘清包括二次有机气溶胶（SOA）在内的深圳市区PM_2.5各种一次和二次来源贡献,本文于2017年9月2日~2018年8月29日在深圳市大学城点位开展PM_2.5样品采集,并进行化学组分和水溶性有机物（WSOM）质谱测量,共获得162组有效数据.观测期间深圳市大气PM_2.5平均质量浓度为26μg/m³,在传统PMF源解析的基础上加入羧基离子碎片（CO₂⁺）作为SOA的示踪物,加入水溶性有机氧（WSOO）用于计算各因子O/C,验证有机物解析效果.结果表明,SOA可以被独立解析出,其O/C明显高于其他一次污染源中有机物;机动车、二次硫酸盐、二次硝酸盐、SOA为最主要的4个源,对PM_2.5质量浓度的贡献分别为25%、23%、17%和10%,船舶、地面扬尘、老化海盐、建筑尘、生物质燃烧、燃煤和工业贡献均在5%以内.各个源的变化特征表明,机动车、二次硫酸盐、二次硝酸盐、SOA等源贡献呈现冬高夏低的季节特征,与冬季季风条件下源自内陆的污染传输密切相关.污染天气时,二次硝酸盐和SOA的贡献增加相对最显著,因此NOx和挥发性有机物是减排的关键.